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Bra008971 protein (Brassica rapa) - STRING interaction network
"Bra008971" - AT5G11320 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008971AT5G11320 (E=2e-207) YUC4 | YUC4 (YUCCA4); monooxygenase/ oxidoreductase (411 aa)    
Predicted Functional Partners:
Bra013823
AT4G24670 (E=8e-188) TAR2 | TAR2 (TRYPTOPHAN AMINOTRANSFERASE RELATED 2); L-tryptophan-2-oxoglutarate aminotransferase/ L-tryptophan-pyruvate aminotransferase/ carbon-sulfur lyase (445 aa)
     
 
  0.917
Bra030906
AT1G54100 (E=4e-265) ALDH7B4 | ALDH7B4 (Aldehyde Dehydrogenase 7B4); 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase (504 aa)
         
  0.853
Bra022128
AT4G34880 (E=1e-121) | amidase family protein (497 aa)
       
  0.844
Bra032205
AT1G44170 (E=3e-232) ALDH3H1, ALDH4 | ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (482 aa)
         
  0.829
Bra024619
AT1G23800 (E=3e-279) ALDH2B7, ALDH2B | ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (536 aa)
         
  0.829
Bra018090
AT3G48000 (E=7e-281) ALDH2B4, ALDH2, ALDH2A | ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD) (539 aa)
         
  0.829
Bra016330
AT1G23800 (E=7e-279) ALDH2B7, ALDH2B | ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (537 aa)
         
  0.829
Bra014022
AT1G44170 (E=2e-236) ALDH3H1, ALDH4 | ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (482 aa)
         
  0.829
Bra011511
AT4G34240 (E=2e-271) ALDH3I1, ALDH3 | ALDH3I1 (ALDEHYDE DEHYDROGENASE 3|1); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (556 aa)
         
  0.829
Bra016203
AT1G70560 (E=9e-197) WEI8, TAA1, SAV3 | TAA1 (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1); L-alanine-2-oxoglutarate aminotransferase/ L-glutamine-2-oxoglutarate aminotransferase/ L-leucine-2-oxoglutarate aminotransferase/ L-methionine-2-oxoglutarate aminotransferase/ L-phenylalanine-2-oxoglut (381 aa)
         
  0.809
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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