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Bra008986 protein (Brassica rapa) - STRING interaction network
"Bra008986" - AT5G11160 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra008986AT5G11160 (E=6e-101) APT5 | APT5 (Adenine phosphoribosyltransferase 5); adenine phosphoribosyltransferase (190 aa)    
Predicted Functional Partners:
Bra027795
AT1G63660 (E=6e-286) | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative (530 aa)
   
  0.991
Bra013309
AT4G18440 (E=1e-258) | adenylosuccinate lyase, putative / adenylosuccinase, putative (533 aa)
   
  0.973
Bra012596
AT4G18440 (E=4e-255) | adenylosuccinate lyase, putative / adenylosuccinase, putative (531 aa)
   
  0.973
Bra005126
AT2G38280 (E=0.0) FAC1, ATAMPD | FAC1 (EMBRYONIC FACTOR1); AMP deaminase (841 aa)
       
  0.956
Bra039707
AT4G14930 (E=8e-153) | acid phosphatase survival protein SurE, putative (307 aa)
       
  0.940
Bra036915
AT4G14930 (E=4e-142) | acid phosphatase survival protein SurE, putative (312 aa)
       
  0.940
Bra016030
AT1G72880 (E=2e-153) | acid phosphatase survival protein SurE, putative (376 aa)
       
  0.940
Bra008057
AT1G72880 (E=1e-161) | acid phosphatase survival protein SurE, putative (381 aa)
       
  0.940
Bra003865
AT1G72880 (E=1e-167) | acid phosphatase survival protein SurE, putative (380 aa)
       
  0.940
Bra034087
AT3G09820 (E=3e-185) ADK1, ATADK1 | ADK1 (adenosine kinase 1); adenosine kinase/ copper ion binding (344 aa)
     
  0.934
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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