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Bra009011 protein (Brassica rapa) - STRING interaction network
"Bra009011" - AT5G10720 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009011AT5G10720 (E=2e-250) AHK5, CKI2 | AHK5 (ARABIDOPSIS HISTIDINE KINASE 5); protein histidine kinase (898 aa)    
Predicted Functional Partners:
Bra000908
AT4G01900 (E=1e-084) PII, GLB1 | GLB1 (GLNB1 HOMOLOG); acetylglutamate kinase regulator (196 aa)
     
 
  0.958
Bra023876
AT3G21510 (E=2e-074) AHP1 | AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1); histidine phosphotransfer kinase (154 aa)
       
  0.942
Bra001099
AT3G04280 (E=1e-051) ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator (143 aa)
 
 
  0.912
Bra014649
AT3G57040 (E=9e-090) ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator (234 aa)
 
 
  0.868
Bra031714
AT1G10470 (E=2e-090) ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator (261 aa)
 
 
  0.866
Bra031714.1-P
AT1G10470 (E=2e-090) ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator (261 aa)
 
 
  0.866
Bra016526
AT1G19050 (E=2e-086) ARR7 | ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator (207 aa)
 
 
  0.862
Bra019932
AT1G10470 (E=1e-087) ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator (253 aa)
 
 
  0.860
Bra003782
AT1G74890 (E=8e-069) ARR15 | ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator (197 aa)
 
 
  0.856
Bra003551
AT1G80100 (E=8e-067) AHP6 | AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups (154 aa)
       
  0.850
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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