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Bra009031 protein (Brassica rapa) - STRING interaction network
"Bra009031" - AT5G10440 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009031AT5G10440 (E=6e-111) CYCD4;2 | CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinase (297 aa)    
Predicted Functional Partners:
Bra018036
AT3G48750 (E=3e-166) CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase (294 aa)
       
  0.999
Bra034614
AT2G27960 (E=4e-040) CKS1, CKS1AT | CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (88 aa)
       
  0.999
Bra018812
AT1G49620 (E=2e-029) KRP7, ICN6, ICK5 | ICK5; cyclin binding / cyclin-dependent protein kinase inhibitor (165 aa)
       
 
  0.998
Bra012894
AT3G50630 (E=2e-063) KRP2, ICK2 | KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein binding (212 aa)
       
 
  0.998
Bra013240
AT3G24810 (E=2e-044) ICK3, KRP5 | ICK3; cyclin-dependent protein kinase inhibitor (199 aa)
       
 
  0.998
Bra037459
AT5G48820 (E=7e-058) KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE); cyclin binding / cyclin-dependent protein kinase inhibitor (207 aa)
       
 
  0.998
Bra022897
AT2G32710 (E=1e-054) KRP4, ACK2, ICK7 | KRP4; cyclin binding / cyclin-dependent protein kinase inhibitor (250 aa)
       
 
  0.998
Bra001736
AT3G19150 (E=9e-016) KRP6, ICK4 | KRP6 (KIP-RELATED PROTEIN 6); cyclin binding / cyclin-dependent protein kinase inhibitor (177 aa)
       
 
  0.998
Bra029917
AT3G48750 (E=3e-165) CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase (312 aa)
       
  0.975
Bra000077
AT2G38620 (E=3e-162) CDKB1;2 | CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase (312 aa)
       
  0.973
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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