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Bra009033 protein (Brassica rapa) - STRING interaction network
"Bra009033" - AT5G44050 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009033AT5G44050 (E=3e-040) | MATE efflux family protein (251 aa)    
Predicted Functional Partners:
Bra021653
AT2G30600 (E=0.0) | BTB/POZ domain-containing protein (799 aa)
           
  0.563
Bra020272
AT5G59980 (E=9e-190) | RNase P subunit p30 family protein (749 aa)
     
 
    0.542
Bra002517
AT5G59980 (E=4e-155) | RNase P subunit p30 family protein (627 aa)
     
 
    0.542
Bra034573
AT4G33580 (E=7e-132) ATBCA5, BCA5 | carbonic anhydrase family protein / carbonate dehydratase family protein (625 aa)
       
 
  0.436
Bra029481
AT4G04020 (E=7e-145) FIB | FIB (FIBRILLIN); structural molecule (318 aa)
           
  0.412
Bra013602
AT4G22240 (E=2e-120) | plastid-lipid associated protein PAP, putative (319 aa)
           
  0.412
Bra000785
AT4G04020 (E=1e-129) FIB | FIB (FIBRILLIN); structural molecule (327 aa)
           
  0.412
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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