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Bra009152 protein (Brassica rapa) - STRING interaction network
"Bra009152" - AT5G05940 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009152AT5G05940 (E=1e-281) ATROPGEF5, ROPGEF5 | ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5); Rho guanyl-nucleotide exchange factor (595 aa)    
Predicted Functional Partners:
Bra016737
AT1G13200 (E=1e-165) | F-box family protein (424 aa)
           
  0.666
Bra022553
AT5G51550 (E=7e-174) EXL3 | EXL3 (EXORDIUM LIKE 3) (337 aa)
           
  0.526
Bra032508
AT1G04450 (E=4e-070) RIC3 | RIC3 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 3); protein binding (221 aa)
           
  0.483
Bra040816
AT2G07040 (E=3e-231) ATPRK2A, PRK2A | PRK2A; ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (619 aa)
       
 
  0.459
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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