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Bra009162 protein (Brassica rapa) - STRING interaction network
"Bra009162" - AT5G06090 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009162AT5G06090 (E=2e-228) ATGPAT7, GPAT7 | GPAT7 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 7); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase (498 aa)    
Predicted Functional Partners:
Bra011598
AT5G60620 (E=5e-213) | phospholipid/glycerol acyltransferase family protein (376 aa)
         
  0.585
Bra035512
AT1G32200 (E=2e-218) ATS1, ACT1 | ATS1; glycerol-3-phosphate O-acyltransferase (454 aa)
         
  0.584
Bra033846
AT1G32200 (E=3e-205) ATS1, ACT1 | ATS1; glycerol-3-phosphate O-acyltransferase (440 aa)
         
  0.581
Bra034109
AT3G10370 (E=0.0) SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol-3-phosphate dehydrogenase (630 aa)
         
  0.549
Bra029833
AT3G10370 (E=0.0) SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol-3-phosphate dehydrogenase (631 aa)
         
  0.549
Bra035180
AT3G10370 (E=1e-304) SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol-3-phosphate dehydrogenase (620 aa)
         
  0.535
Bra024062
AT4G30580 (E=6e-152) ATS2, EMB1995 | ATS2; 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase (384 aa)
         
  0.531
Bra030448
AT1G51260 (E=3e-178) LPAT3 | LPAT3; 1-acylglycerol-3-phosphate O-acyltransferase (376 aa)
         
  0.447
Bra008174
AT1G75020 (E=6e-172) LPAT4 | LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4); acyltransferase (382 aa)
         
  0.413
Bra004628
AT2G41540 (E=3e-255) GPDHC1 | GPDHC1; NAD or NADH binding / glycerol-3-phosphate dehydrogenase (NAD+) (464 aa)
         
  0.410
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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