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Bra009163 protein (Brassica rapa) - STRING interaction network
"Bra009163" - AT5G06120 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009163AT5G06120 (E=0.0) | Ran-binding protein, putative (1052 aa)    
Predicted Functional Partners:
Bra018732
AT1G48550 (E=1e-171) | vacuolar protein sorting-associated protein 26 family protein / VPS26 family protein (327 aa)
       
      0.615
Bra023593
AT5G17020 (E=0.0) XPO1A, ATCRM1, ATXPO1, XPO1 | XPO1A; protein binding / protein transporter/ receptor (1088 aa)
     
 
  0.612
Bra038020
AT1G55830 (E=9e-113) | unknown protein (488 aa)
       
      0.612
Bra038016
AT1G55830 (E=4e-019) | unknown protein (155 aa)
       
      0.612
Bra009976
AT3G05040 (E=0.0) HST, HST1 | HST (HASTY); nucleocytoplasmic transporter (1204 aa)
     
 
  0.611
Bra021372
AT3G03110 (E=0.0) XPO1B, CRM1B | XPO1B; binding / protein transporter (1078 aa)
     
 
  0.611
Bra040117
AT3G05040 (E=6e-212) HST, HST1 | HST (HASTY); nucleocytoplasmic transporter (1500 aa)
     
 
  0.610
Bra039468
AT3G05040 (E=5e-020) HST, HST1 | HST (HASTY); nucleocytoplasmic transporter (108 aa)
     
 
  0.610
Bra032016
AT3G03110 (E=0.0) XPO1B, CRM1B | XPO1B; binding / protein transporter (1037 aa)
     
 
  0.610
Bra008580
AT5G17020 (E=0.0) XPO1A, ATCRM1, ATXPO1, XPO1 | XPO1A; protein binding / protein transporter/ receptor (1125 aa)
     
 
  0.610
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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