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Bra009192 protein (Brassica rapa) - STRING interaction network
"Bra009192" - AT5G06410 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra009192AT5G06410 (E=1e-094) | DNAJ heat shock N-terminal domain-containing protein (265 aa)    
Predicted Functional Partners:
Bra029483
AT4G04080 (E=3e-050) ISU3, ATISU3 | ISU3 (ISCU-LIKE 3); structural molecule (115 aa)
 
 
  0.987
Bra020855
AT4G22220 (E=1e-084) ISU1, ATISU1 | ISU1; structural molecule ; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (164 aa)
 
 
  0.987
Bra013601
AT4G22220 (E=8e-084) ISU1, ATISU1 | ISU1; structural molecule ; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (159 aa)
 
 
  0.987
Bra028628
AT5G09590 (E=0.0) MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding (680 aa)
   
  0.915
Bra028626
AT5G09590 (E=5e-025) MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding (156 aa)
   
  0.915
Bra019231
AT4G24280 (E=0.0) cpHsc70-1 | cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding (710 aa)
   
  0.915
Bra013788
AT4G24280 (E=2e-114) cpHsc70-1 | cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding (534 aa)
   
  0.915
Bra013786
AT4G24280 (E=0.0) cpHsc70-1 | cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding (711 aa)
   
  0.915
Bra011794
AT4G37910 (E=0.0) mtHsc70-1 | mtHsc70-1 (mitochondrial heat shock protein 70-1); ATP binding (682 aa)
   
  0.915
Bra010620
AT4G37910 (E=0.0) mtHsc70-1 | mtHsc70-1 (mitochondrial heat shock protein 70-1); ATP binding (676 aa)
   
  0.915
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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