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Bra025658.1-P protein (Brassica rapa) - STRING interaction network
"Bra025658.1-P" - Uncharacterized protein in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra025658.1-PUncharacterized protein; AT5G39610 (E=4e-137) ATNAC2, ORE1, ANAC092, ATNAC6 | ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6); protein heterodimerization/ protein homodimerization/ transcription factor (289 aa)    
Predicted Functional Partners:
NAP
Uncharacterized protein; AT1G69490 (E=2e-116) NAP, ANAC029, ATNAP | NAP (NAC-like, activated by AP3/PI); transcription factor (239 aa)
     
 
0.779
Bra036482.1-P
Uncharacterized protein; AT2G20570 (E=5e-152) GPRI1, GLK1 | GPRI1 (GBF’S PRO-RICH REGION-INTERACTING FACTOR 1); transcription factor/ transcription regulator (434 aa)
       
 
  0.647
Bra031129.1-P
Uncharacterized protein; AT2G20570 (E=1e-140) GPRI1, GLK1 | GPRI1 (GBF’S PRO-RICH REGION-INTERACTING FACTOR 1); transcription factor/ transcription regulator (416 aa)
       
 
  0.647
Bra009539.1-P
Uncharacterized protein; AT5G03280 (E=0.0) EIN2, PIR2, CKR1, ERA3, ORE3, ORE2, ATEIN2 | EIN2 (ETHYLENE INSENSITIVE 2); transporter (1311 aa)
           
  0.644
Bra036015.1-P
Uncharacterized protein; AT5G44190 (E=3e-146) GLK2, ATGLK2, GPRI2 | GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor/ transcription regulator (370 aa)
       
 
  0.566
Bra033726.1-P
Uncharacterized protein; AT5G44190 (E=8e-153) GLK2, ATGLK2, GPRI2 | GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor/ transcription regulator (375 aa)
       
 
  0.566
Bra034882.1-P
Uncharacterized protein; AT4G13250 (E=1e-247) | short-chain dehydrogenase/reductase (SDR) family protein (497 aa)
           
  0.526
Bra032697.1-P
Uncharacterized protein; AT4G13250 (E=2e-133) | short-chain dehydrogenase/reductase (SDR) family protein (529 aa)
           
  0.526
Bra031635.1-P
Uncharacterized protein; AT1G08610 (E=8e-230) | pentatricopeptide (PPR) repeat-containing protein (538 aa)
           
  0.499
BrCysP1
Uncharacterized protein; AT5G45890 (E=2e-143) SAG12 | SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase; Belongs to the peptidase C1 family (344 aa)
           
  0.497
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica rapa, Brassica rapa L., field mustard
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