STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_000275SGL domain-containing protein. (377 aa)    
Predicted Functional Partners:
PBRA_004863
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.827
PBRA_005533
HRDC domain-containing protein.
   
 
 0.809
PBRA_008062
Tr-type G domain-containing protein.
  
  
 0.807
PBRA_008506
Tr-type G domain-containing protein.
  
  
 0.807
PBRA_004156
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
  
 0.793
PBRA_006571
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
  
 0.785
PBRA_007006
S4 RNA-binding domain-containing protein.
  
  
 0.785
PBRA_008276
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
    0.781
PBRA_006628
Uncharacterized protein.
   
  
 0.780
PBRA_006826
Uncharacterized protein.
  
  
 0.780
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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