STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_009279Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
PBRA_004406
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.864
PBRA_005757
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.811
PBRA_006887
Uncharacterized protein.
    
 0.800
PBRA_007885
Uncharacterized protein.
  
0.796
PBRA_009365
Uncharacterized protein.
  
0.796
PBRA_006206
Uncharacterized protein.
    
 0.785
PBRA_003140
Sec8_exocyst domain-containing protein.
    
 0.776
PBRA_000082
t-SNARE coiled-coil homology domain-containing protein.
   
 0.768
PBRA_002870
Sec3_C domain-containing protein.
    
 0.763
PBRA_000268
Uncharacterized protein.
    
 0.761
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.