STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_002948Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
PBRA_000049
LMWPc domain-containing protein.
     
 0.666
PBRA_007885
Uncharacterized protein.
   
 
 0.653
PBRA_009365
Uncharacterized protein.
   
 
 0.653
PBRA_007960
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
 
  
   0.601
PBRA_002277
Uncharacterized protein.
    
 0.593
PBRA_006464
2Fe-2S ferredoxin-type domain-containing protein.
    
 
 0.589
PBRA_008000
2Fe-2S ferredoxin-type domain-containing protein.
    
 
 0.589
PBRA_003369
Glutamine amidotransferase type-1 domain-containing protein.
    
  0.588
PBRA_002094
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.586
PBRA_002033
Uncharacterized protein.
    
   0.578
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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