STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL68940.1Serine/threonine specific protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). (391 aa)    
Predicted Functional Partners:
ACL69458.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor.
  
 
 0.960
ACL68939.1
Putative PAS/PAC sensor protein; PFAM: Putative Fe-S cluster; PAS fold; PAS fold; Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 4Fe-4S binding domain; TIGRFAM: PAS domain S-box.
 
     0.959
ACL70679.1
PFAM: Biotin and Thiamin Synthesis associated domain; Radical SAM superfamily; TIGRFAM: thiazole biosynthesis protein ThiH.
  
  
 0.944
ACL70403.1
Hypothetical protein.
   
    0.931
ACL71008.1
Anti-sigma-factor antagonist; PFAM: STAS domain.
  
 
 0.928
ACL68967.1
Putative PAS/PAC sensor protein; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; 4Fe-4S binding domain; Iron only hydrogenase large subunit, C-terminal domain; TIGRFAM: PAS domain S-box.
 
     0.831
ACL68942.1
PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; 4Fe-4S binding domain; 4Fe-4S binding domain.
       0.828
ACL68943.1
PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; 2Fe-2S iron-sulfur cluster binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenases, Fe-only.
 
     0.820
ACL68941.1
PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.
       0.780
ACL68969.1
Hypothetical protein.
 
     0.762
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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