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Hore_05800 protein (Halothermothrix orenii) - STRING interaction network
"Hore_05800" - Putative pre-16S rRNA nuclease in Halothermothrix orenii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Hore_05800Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)    
Predicted Functional Partners:
Hore_05810
annotation not available (88 aa)
              0.864
Hore_05790
annotation not available (495 aa)
              0.816
Hore_05770
annotation not available (707 aa)
              0.643
Hore_05780
PFAM- Cell division protein FtsA; TIGRFAM- cell division protein FtsA (420 aa)
              0.640
Hore_05830
O-methyltransferase family 3; PFAM- O-methyltransferase; Methyltransferase domain (212 aa)
 
          0.608
mltG
Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation (337 aa)
   
   
  0.591
Hore_05760
UPF0297 protein Hore_05760; PFAM- Bacterial protein of unknown function (DUF965); Belongs to the UPF0297 family (86 aa)
 
          0.589
Hore_05840
PFAM- Peptidase family U32 (406 aa)
              0.548
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (876 aa)
   
        0.481
Hore_05860
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (232 aa)
   
        0.432
Your Current Organism:
Halothermothrix orenii
NCBI taxonomy Id: 373903
Other names: H. orenii H 168, Halothermothrix orenii, Halothermothrix orenii H 168, Halothermothrix orenii str. H 168, Halothermothrix orenii strain H 168
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