node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACL69971.1 | polA | Hore_12210 | Hore_04860 | PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.645 |
ACL69971.1 | ruvA | Hore_12210 | Hore_12320 | PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.499 |
ACL69971.1 | ruvB | Hore_12210 | Hore_12310 | PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.526 |
ACL69971.1 | ruvC | Hore_12210 | Hore_12330 | PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.601 |
ACL69978.1 | ACL69985.1 | Hore_12280 | Hore_12350 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. | 0.408 |
ACL69978.1 | polA | Hore_12280 | Hore_04860 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.543 |
ACL69978.1 | queA | Hore_12280 | Hore_12300 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.706 |
ACL69978.1 | ruvA | Hore_12280 | Hore_12320 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.522 |
ACL69978.1 | ruvB | Hore_12280 | Hore_12310 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.525 |
ACL69978.1 | ruvC | Hore_12280 | Hore_12330 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.517 |
ACL69978.1 | tgt | Hore_12280 | Hore_12290 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.745 |
ACL69984.1 | ACL69985.1 | Hore_12340 | Hore_12350 | Hypothetical protein. | PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. | 0.584 |
ACL69984.1 | queA | Hore_12340 | Hore_12300 | Hypothetical protein. | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.487 |
ACL69984.1 | ruvA | Hore_12340 | Hore_12320 | Hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.553 |
ACL69984.1 | ruvB | Hore_12340 | Hore_12310 | Hypothetical protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.559 |
ACL69984.1 | ruvC | Hore_12340 | Hore_12330 | Hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.553 |
ACL69985.1 | ACL69978.1 | Hore_12350 | Hore_12280 | PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | 0.408 |
ACL69985.1 | ACL69984.1 | Hore_12350 | Hore_12340 | PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. | Hypothetical protein. | 0.584 |
ACL69985.1 | queA | Hore_12350 | Hore_12300 | PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.498 |
ACL69985.1 | ruvA | Hore_12350 | Hore_12320 | PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.874 |