STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY52766.1HEAT repeat-containing protein; PFAM: HEAT repeat. (977 aa)    
Predicted Functional Partners:
AFY52767.1
HEAT repeat-containing protein; PFAM: Adaptin N terminal region; PBS lyase HEAT-like repeat.
 
    
0.687
AFY54585.1
PFAM: O-Antigen ligase.
  
     0.656
AFY52768.1
HEAT repeat-containing protein; PFAM: Adaptin N terminal region; HEAT repeat.
 
    
0.613
AFY56042.1
Conserved repeat protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
     0.607
AFY54580.1
Putative N-acetylglucosaminyltransferase; PFAM: Core-2/I-Branching enzyme.
  
     0.600
AFY57463.1
PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.598
AFY52765.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
 
     0.588
AFY53490.1
Histidine kinase with GAF domain; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain.
  
     0.586
AFY58141.1
Putative N-acetylglucosaminyltransferase; PFAM: Core-2/I-Branching enzyme.
  
     0.580
AFY54578.1
Putative N-acetylglucosaminyltransferase; PFAM: Core-2/I-Branching enzyme.
  
     0.568
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.