STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plsBGlycerol-3-phosphate acyltransferase; Identified by similarity to SP:P00482; match to protein family HMM PF01553; Belongs to the GPAT/DAPAT family. (821 aa)    
Predicted Functional Partners:
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by similarity to SP:P26647; match to protein family HMM PF01553; match to protein family HMM TIGR00530; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
 
 
 0.963
gpsA
Glycerol-3-phosphate dehydrogenase; Identified by similarity to SP:P37606; match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF07479; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.914
degQ
Serine protease; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.
  
 
 0.615
BCI_0190
Conserved hypothetical protein; Identified by match to protein family HMM PF04219.
  
     0.581
nfuA
yhgI protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
     0.557
dsbA
Thiol:disulfide interchange protein DsbA; Identified by similarity to SP:P24991; match to protein family HMM PF01323.
  
     0.467
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.458
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by similarity to SP:P23830; match to protein family HMM PF00614.
 
 
 0.445
metA
Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
       0.421
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.416
Your Current Organism:
Baumannia cicadellinicola
NCBI taxonomy Id: 374463
Other names: B. cicadellinicola str. Hc (Homalodisca coagulata), Baumannia cicadellinicola endosymbiont of Homalodisca coagulata, Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
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