node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kcr_0120 | Kcr_0175 | Kcr_0120 | Kcr_0175 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | 0.688 |
Kcr_0120 | Kcr_1588 | Kcr_0120 | Kcr_1588 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | PFAM: ribosomal protein S9; KEGG: mth:MTH39 30S ribosomal protein S9/L13; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
Kcr_0120 | rpl13 | Kcr_0120 | Kcr_1587 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
Kcr_0120 | rpl2 | Kcr_0120 | Kcr_1490 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.996 |
Kcr_0120 | rpl22 | Kcr_0120 | Kcr_1182 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.998 |
Kcr_0120 | rpl6 | Kcr_0120 | Kcr_1566 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.997 |
Kcr_0120 | rps15 | Kcr_0120 | Kcr_1419 | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | PFAM: ribosomal protein S15; Ribosomal S13S15 domain protein; KEGG: tko:TK1251 SSU ribosomal protein S15P. | 0.995 |
Kcr_0175 | Kcr_0120 | Kcr_0175 | Kcr_0120 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | 0.688 |
Kcr_0175 | Kcr_0928 | Kcr_0175 | Kcr_0928 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tpe:Tpen_1395 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. | 0.659 |
Kcr_0175 | Kcr_1588 | Kcr_0175 | Kcr_1588 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | PFAM: ribosomal protein S9; KEGG: mth:MTH39 30S ribosomal protein S9/L13; Belongs to the universal ribosomal protein uS9 family. | 0.630 |
Kcr_0175 | apgM | Kcr_0175 | Kcr_1216 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | Phosphonopyruvate decarboxylase-related protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.911 |
Kcr_0175 | ilvC | Kcr_0175 | Kcr_0639 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.614 |
Kcr_0175 | rpl13 | Kcr_0175 | Kcr_1587 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.672 |
Kcr_0175 | rpl2 | Kcr_0175 | Kcr_1490 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.641 |
Kcr_0175 | rpl22 | Kcr_0175 | Kcr_1182 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.700 |
Kcr_0175 | rpl6 | Kcr_0175 | Kcr_1566 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.664 |
Kcr_0175 | rps15 | Kcr_0175 | Kcr_1419 | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | PFAM: ribosomal protein S15; Ribosomal S13S15 domain protein; KEGG: tko:TK1251 SSU ribosomal protein S15P. | 0.637 |
Kcr_0928 | Kcr_0175 | Kcr_0928 | Kcr_0175 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tpe:Tpen_1395 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. | PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pab:PAB0514 phosphoglycerate dehydrogenase (serA), Nter fragment. | 0.659 |
Kcr_0928 | Kcr_1588 | Kcr_0928 | Kcr_1588 | PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tpe:Tpen_1395 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. | PFAM: ribosomal protein S9; KEGG: mth:MTH39 30S ribosomal protein S9/L13; Belongs to the universal ribosomal protein uS9 family. | 0.534 |
Kcr_1588 | Kcr_0120 | Kcr_1588 | Kcr_0120 | PFAM: ribosomal protein S9; KEGG: mth:MTH39 30S ribosomal protein S9/L13; Belongs to the universal ribosomal protein uS9 family. | PFAM: ribosomal protein L16; KEGG: sto:ST2264 50S ribosomal protein L10e. | 0.996 |