STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0409TIGRFAM: daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: tpe:Tpen_1593 daunorubicin resistance ABC transporter, inner membrane subunit B. (257 aa)    
Predicted Functional Partners:
Kcr_0410
KEGG: tko:TK1144 ABC-type multidrug transport system, ATPase component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.955
Kcr_0542
KEGG: tpe:Tpen_1560 ABC transporter related; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.806
Kcr_0411
PFAM: transcriptional regulator PadR family protein; KEGG: pfu:PF0584 hypothetical protein.
     
 0.801
Kcr_0645
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hbu:Hbut_1439 predicted ABC transporter.
  
 0.680
Kcr_0412
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sfu:Sfum_3263 methyltransferase type 11.
       0.572
Kcr_1141
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1006 putative ABC-2 type transport system ATP-binding protein.
  
 0.518
Kcr_0539
PFAM: nitroreductase; KEGG: smr:Smar_0105 nitroreductase.
  
  
 0.500
Kcr_0653
PFAM: nitroreductase; KEGG: pth:PTH_0662 nitroreductase.
  
  
 0.500
Kcr_0946
KEGG: tko:TK0840 NAD(P)H-flavin oxidoreductase.
  
  
 0.500
Kcr_1149
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_2942 ABC transporter related protein.
  
 0.492
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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