STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0772PFAM: Radical SAM domain protein; KEGG: afu:AF1125 heme biosynthesis protein (NirJ-1). (349 aa)    
Predicted Functional Partners:
Kcr_0773
PFAM: Radical SAM domain protein; KEGG: hbu:Hbut_0035 Fe-S oxidoreductase - arylsulfatase regulator AslB.
 
    
0.819
Kcr_0771
Hypothetical protein.
       0.773
Kcr_0770
PFAM: regulatory protein AsnC/Lrp family; KEGG: tko:TK1210 transcription regulator, Lrp/AsnC family.
  
  
 0.583
Kcr_0774
PFAM: Vitamin B6 biosynthesis protein; thiazole biosynthesis family protein; KEGG: pas:Pars_0228 vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family.
       0.524
pdxT
SNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
       0.519
Kcr_0778
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: smr:Smar_0667 radical SAM domain protein.
  
     0.422
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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