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STRINGSTRING
Kcr_0772 protein (Korarchaeum cryptofilum) - STRING interaction network
"Kcr_0772" - PFAM: Radical SAM domain protein in Korarchaeum cryptofilum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0772PFAM- Radical SAM domain protein; KEGG- afu-AF1125 heme biosynthesis protein (NirJ-1) (349 aa)    
Predicted Functional Partners:
Kcr_0773
PFAM- Radical SAM domain protein; KEGG- hbu-Hbut_0035 Fe-S oxidoreductase - arylsulfatase regulator AslB (361 aa)
 
       
0.873
Kcr_0771
annotation not available (181 aa)
              0.845
Kcr_0770
PFAM- regulatory protein AsnC/Lrp family; KEGG- tko-TK1210 transcription regulator, Lrp/AsnC family (151 aa)
   
 
  0.686
Kcr_0774
PFAM- Vitamin B6 biosynthesis protein; thiazole biosynthesis family protein; KEGG- pas-Pars_0228 vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family (339 aa)
              0.568
pdxT
Pyridoxal 5’-phosphate synthase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5’-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS (197 aa)
              0.562
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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