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gyaR protein (Korarchaeum cryptofilum) - STRING interaction network
"gyaR" - Glyoxylate reductase in Korarchaeum cryptofilum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gyaRGlyoxylate reductase; PFAM- D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG- pho-PH0597 D-3-phosphoglycerate dehydrogenase (332 aa)    
Predicted Functional Partners:
Kcr_1277
Hydroxypyruvate reductase; PFAM- MOFRL domain protein; KEGG- tpe-Tpen_0207 hydroxypyruvate reductase (458 aa)
 
 
  0.965
Kcr_1187
PFAM- FAD linked oxidase domain protein; KEGG- dps-DP0059 probable glycolate oxidase subunit (GlcD) (446 aa)
   
 
  0.928
Kcr_0942
PFAM- FAD linked oxidase domain protein; KEGG- tac-Ta0542 putative glycolate oxidase (461 aa)
   
 
  0.928
Kcr_0212
PFAM- Endonuclease V; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG- mka-MK1435 deoxyinosine 3’endonuclease (endonuclease V) (294 aa)
         
  0.650
Kcr_0873
PFAM- amino acid permease-associated region; KEGG- mta-Moth_1345 amino acid permease-associated region (625 aa)
   
   
  0.650
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (360 aa)
   
   
  0.637
Kcr_0497
PFAM- aldehyde dehydrogenase; KEGG- sto-ST1116 methylmalonate-semialdehyde dehydrogenase (490 aa)
 
   
  0.605
Kcr_1208
PFAM- PfkB domain protein; KEGG- pis-Pisl_1117 PfkB domain protein (301 aa)
 
   
  0.601
Kcr_0928
PFAM- Pyridoxal-5’-phosphate-dependent protein beta subunit; KEGG- tpe-Tpen_1395 pyridoxal-5’-phosphate-dependent enzyme, beta subunit (300 aa)
 
   
  0.579
Kcr_1549
PFAM- protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG- sto-ST0557 elongation factor EF-1 alpha subunit (493 aa)
              0.566
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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