STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_016726Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
DVH24_032406
Uncharacterized protein.
      
 0.513
DVH24_011899
MoaC domain-containing protein.
     
 0.505
DVH24_006740
Elp3 domain-containing protein.
     
 0.505
DVH24_007902
HMA domain-containing protein.
      
 0.497
DVH24_001317
HMA domain-containing protein.
      
 0.497
DVH24_004992
Thioredoxin domain-containing protein.
     
 0.487
DVH24_004983
Thioredoxin reductase.
     
 0.487
DVH24_004988
Uncharacterized protein.
     
 0.487
DVH24_026080
PAP-associated domain-containing protein.
      
 0.445
DVH24_023493
Uncharacterized protein.
      
 0.444
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.