STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_029452FAD-binding PCMH-type domain-containing protein. (519 aa)    
Predicted Functional Partners:
DVH24_004228
ETF domain-containing protein.
  
 
 0.667
DVH24_025600
S-adenosylmethionine decarboxylase proenzyme.
      
 0.579
DVH24_039754
Uncharacterized protein.
  
 
 0.579
DVH24_008549
Malate synthase; Belongs to the malate synthase family.
  
 
 0.579
IAA12
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
      
 0.565
DVH24_013225
Uncharacterized protein.
      
 0.563
DVH24_037409
Uncharacterized protein.
      
 0.563
DVH24_041497
Uncharacterized protein.
      
 0.563
DVH24_018080
Aminotran_1_2 domain-containing protein.
  
  
 0.514
DVH24_012348
PNP_UDP_1 domain-containing protein.
      
 0.509
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.