Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RD1_0756 | tauA | RD1_0756 | RD1_0982 | ABC transporter, permease protein, putative. | Taurine ABC transporter, periplasmic binding protein. | 0.504 |
RD1_0756 | tauB | RD1_0756 | RD1_0983 | ABC transporter, permease protein, putative. | Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.597 |
RD1_0985 | RD1_0986 | RD1_0985 | RD1_0986 | Hypothetical protein. | Hypothetical protein. | 0.613 |
RD1_0985 | RD1_0987 | RD1_0985 | RD1_0987 | Hypothetical protein. | Fatty acid desaturase, putative. | 0.613 |
RD1_0985 | tauA | RD1_0985 | RD1_0982 | Hypothetical protein. | Taurine ABC transporter, periplasmic binding protein. | 0.510 |
RD1_0985 | tauB | RD1_0985 | RD1_0983 | Hypothetical protein. | Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.773 |
RD1_0985 | tauC | RD1_0985 | RD1_0984 | Hypothetical protein. | Taurine ABC transporter, permease protein. | 0.773 |
RD1_0986 | RD1_0985 | RD1_0986 | RD1_0985 | Hypothetical protein. | Hypothetical protein. | 0.613 |
RD1_0986 | RD1_0987 | RD1_0986 | RD1_0987 | Hypothetical protein. | Fatty acid desaturase, putative. | 0.773 |
RD1_0986 | tauA | RD1_0986 | RD1_0982 | Hypothetical protein. | Taurine ABC transporter, periplasmic binding protein. | 0.415 |
RD1_0986 | tauB | RD1_0986 | RD1_0983 | Hypothetical protein. | Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.613 |
RD1_0986 | tauC | RD1_0986 | RD1_0984 | Hypothetical protein. | Taurine ABC transporter, permease protein. | 0.613 |
RD1_0987 | RD1_0985 | RD1_0987 | RD1_0985 | Fatty acid desaturase, putative. | Hypothetical protein. | 0.613 |
RD1_0987 | RD1_0986 | RD1_0987 | RD1_0986 | Fatty acid desaturase, putative. | Hypothetical protein. | 0.773 |
RD1_0987 | tauA | RD1_0987 | RD1_0982 | Fatty acid desaturase, putative. | Taurine ABC transporter, periplasmic binding protein. | 0.415 |
RD1_0987 | tauB | RD1_0987 | RD1_0983 | Fatty acid desaturase, putative. | Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.613 |
RD1_0987 | tauC | RD1_0987 | RD1_0984 | Fatty acid desaturase, putative. | Taurine ABC transporter, permease protein. | 0.613 |
modB | tauB | RD1_2914 | RD1_0983 | Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.872 |
nasE | nasF | RD1_4170 | RD1_4172 | Nitrate ABC transporter, permease component. | Nitrate transporter substrate-binding. | 0.995 |
nasE | nasS | RD1_4170 | RD1_4173 | Nitrate ABC transporter, permease component. | Nitrate transport ATP-binding protein. | 0.924 |
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