Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RD1_2848 | RD1_2849 | RD1_2848 | RD1_2849 | Pyrroline-5-carboxylate reductase, putative. | AMP-binding domain protein. | 0.574 |
| RD1_2848 | aat | RD1_2848 | RD1_2852 | Pyrroline-5-carboxylate reductase, putative. | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.451 |
| RD1_2848 | accC | RD1_2848 | RD1_2851 | Pyrroline-5-carboxylate reductase, putative. | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.401 |
| RD1_2849 | RD1_2848 | RD1_2849 | RD1_2848 | AMP-binding domain protein. | Pyrroline-5-carboxylate reductase, putative. | 0.574 |
| RD1_2849 | aat | RD1_2849 | RD1_2852 | AMP-binding domain protein. | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.494 |
| RD1_2849 | accB | RD1_2849 | RD1_2850 | AMP-binding domain protein. | acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.553 |
| RD1_2849 | accC | RD1_2849 | RD1_2851 | AMP-binding domain protein. | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.536 |
| RD1_3103 | aat | RD1_3103 | RD1_2852 | Dihydroorotate dehydrogenase family protein, putative. | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.446 |
| aat | RD1_2848 | RD1_2852 | RD1_2848 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Pyrroline-5-carboxylate reductase, putative. | 0.451 |
| aat | RD1_2849 | RD1_2852 | RD1_2849 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | AMP-binding domain protein. | 0.494 |
| aat | RD1_3103 | RD1_2852 | RD1_3103 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Dihydroorotate dehydrogenase family protein, putative. | 0.446 |
| aat | accB | RD1_2852 | RD1_2850 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.832 |
| aat | accC | RD1_2852 | RD1_2851 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.842 |
| aat | ate | RD1_2852 | RD1_2805 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | arginine-tRNA-protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.769 |
| aat | clpS | RD1_2852 | RD1_1279 | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease, putative; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.814 |
| accB | RD1_2849 | RD1_2850 | RD1_2849 | acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | AMP-binding domain protein. | 0.553 |
| accB | aat | RD1_2850 | RD1_2852 | acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | leucyl/phenylalanyl-tRNA--protein transferase, putative; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.832 |
| accB | accC | RD1_2850 | RD1_2851 | acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.999 |
| accC | RD1_2848 | RD1_2851 | RD1_2848 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyrroline-5-carboxylate reductase, putative. | 0.401 |
| accC | RD1_2849 | RD1_2851 | RD1_2849 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | AMP-binding domain protein. | 0.536 |
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