Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RD1_0357 | RD1_0501 | RD1_0357 | RD1_0501 | Hybrid sensory histidine kinase, putative. | Putative cyclase. | 0.565 |
RD1_0357 | RD1_0881 | RD1_0357 | RD1_0881 | Hybrid sensory histidine kinase, putative. | Histidine kinase, putative. | 0.919 |
RD1_0357 | RD1_1488 | RD1_0357 | RD1_1488 | Hybrid sensory histidine kinase, putative. | Histidine kinase, putative. | 0.971 |
RD1_0357 | RD1_1968 | RD1_0357 | RD1_1968 | Hybrid sensory histidine kinase, putative. | Sensory box protein, putative. | 0.941 |
RD1_0357 | RD1_1969 | RD1_0357 | RD1_1969 | Hybrid sensory histidine kinase, putative. | Sensory box protein, putative. | 0.966 |
RD1_0357 | RD1_2927 | RD1_0357 | RD1_2927 | Hybrid sensory histidine kinase, putative. | Conserved domain protein. | 0.581 |
RD1_0357 | RD1_3107 | RD1_0357 | RD1_3107 | Hybrid sensory histidine kinase, putative. | Probable regulator protein containing CheR-and CheB-like domains. | 0.991 |
RD1_0357 | RD1_3577 | RD1_0357 | RD1_3577 | Hybrid sensory histidine kinase, putative. | Sensory box histidine kinase/response regulator, putative. | 0.963 |
RD1_0357 | RD1_3595 | RD1_0357 | RD1_3595 | Hybrid sensory histidine kinase, putative. | Two-component hybrid sensor and regulator, putative. | 0.949 |
RD1_0357 | cyaA | RD1_0357 | RD1_2687 | Hybrid sensory histidine kinase, putative. | Adenylate cyclase 1, putative. | 0.656 |
RD1_0501 | RD1_0357 | RD1_0501 | RD1_0357 | Putative cyclase. | Hybrid sensory histidine kinase, putative. | 0.565 |
RD1_0501 | RD1_0881 | RD1_0501 | RD1_0881 | Putative cyclase. | Histidine kinase, putative. | 0.611 |
RD1_0501 | RD1_1488 | RD1_0501 | RD1_1488 | Putative cyclase. | Histidine kinase, putative. | 0.607 |
RD1_0501 | RD1_1968 | RD1_0501 | RD1_1968 | Putative cyclase. | Sensory box protein, putative. | 0.522 |
RD1_0501 | RD1_1969 | RD1_0501 | RD1_1969 | Putative cyclase. | Sensory box protein, putative. | 0.862 |
RD1_0501 | RD1_2927 | RD1_0501 | RD1_2927 | Putative cyclase. | Conserved domain protein. | 0.670 |
RD1_0501 | RD1_3107 | RD1_0501 | RD1_3107 | Putative cyclase. | Probable regulator protein containing CheR-and CheB-like domains. | 0.676 |
RD1_0501 | RD1_3577 | RD1_0501 | RD1_3577 | Putative cyclase. | Sensory box histidine kinase/response regulator, putative. | 0.620 |
RD1_0501 | RD1_3595 | RD1_0501 | RD1_3595 | Putative cyclase. | Two-component hybrid sensor and regulator, putative. | 0.582 |
RD1_0501 | cyaA | RD1_0501 | RD1_2687 | Putative cyclase. | Adenylate cyclase 1, putative. | 0.965 |
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