node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RD1_3117 | RD1_3119 | RD1_3117 | RD1_3119 | DNA polymerase III, chi subunit, putative. | Membrane protein, putative. | 0.786 |
RD1_3117 | RD1_3120 | RD1_3117 | RD1_3120 | DNA polymerase III, chi subunit, putative. | Permease YjgP/YjgQ family, putative. | 0.807 |
RD1_3117 | ksgA | RD1_3117 | RD1_3124 | DNA polymerase III, chi subunit, putative. | Dimethyladenosine transferase, putative; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.795 |
RD1_3117 | ost | RD1_3117 | RD1_3121 | DNA polymerase III, chi subunit, putative. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.835 |
RD1_3117 | pdxA | RD1_3117 | RD1_3123 | DNA polymerase III, chi subunit, putative. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.738 |
RD1_3117 | surA | RD1_3117 | RD1_3122 | DNA polymerase III, chi subunit, putative. | Peptidyl-prolyl cis-trans isomerase SurA, putative. | 0.789 |
RD1_3119 | RD1_3117 | RD1_3119 | RD1_3117 | Membrane protein, putative. | DNA polymerase III, chi subunit, putative. | 0.786 |
RD1_3119 | RD1_3120 | RD1_3119 | RD1_3120 | Membrane protein, putative. | Permease YjgP/YjgQ family, putative. | 0.999 |
RD1_3119 | ksgA | RD1_3119 | RD1_3124 | Membrane protein, putative. | Dimethyladenosine transferase, putative; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.813 |
RD1_3119 | ost | RD1_3119 | RD1_3121 | Membrane protein, putative. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.967 |
RD1_3119 | pdxA | RD1_3119 | RD1_3123 | Membrane protein, putative. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.856 |
RD1_3119 | surA | RD1_3119 | RD1_3122 | Membrane protein, putative. | Peptidyl-prolyl cis-trans isomerase SurA, putative. | 0.881 |
RD1_3120 | RD1_3117 | RD1_3120 | RD1_3117 | Permease YjgP/YjgQ family, putative. | DNA polymerase III, chi subunit, putative. | 0.807 |
RD1_3120 | RD1_3119 | RD1_3120 | RD1_3119 | Permease YjgP/YjgQ family, putative. | Membrane protein, putative. | 0.999 |
RD1_3120 | ksgA | RD1_3120 | RD1_3124 | Permease YjgP/YjgQ family, putative. | Dimethyladenosine transferase, putative; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.836 |
RD1_3120 | ost | RD1_3120 | RD1_3121 | Permease YjgP/YjgQ family, putative. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.974 |
RD1_3120 | pdxA | RD1_3120 | RD1_3123 | Permease YjgP/YjgQ family, putative. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.856 |
RD1_3120 | surA | RD1_3120 | RD1_3122 | Permease YjgP/YjgQ family, putative. | Peptidyl-prolyl cis-trans isomerase SurA, putative. | 0.856 |
gyrB | ksgA | RD1_0212 | RD1_3124 | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Dimethyladenosine transferase, putative; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.485 |
gyrB | pdxA | RD1_0212 | RD1_3123 | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.744 |