STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutFFormiminoglutamate deiminase, putative. (454 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase, putative; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.989
hutG-2
N-formylglutamate amidohydrolase, putative.
 
 
 0.989
RD1_2061
N-formylglutamate amidohydrolase, putative.
 
 
 0.978
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.894
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.877
hutC
Histidine utilization repressor, putative.
  
 0.870
hutG
N-formylglutamate amidohydrolase, putative.
 
 
 0.659
acdA-3
acyl-CoA dehydrogenase.
  
    0.567
RD1_3675
Aminotransferase, putative.
  
   0.565
RD1_3680
CAIB/BAIF family protein; Belongs to the CoA-transferase III family.
       0.553
Your Current Organism:
Roseobacter denitrificans
NCBI taxonomy Id: 375451
Other names: Erythrobacter sp. OCh114, R. denitrificans OCh 114, Roseobacter denitrificans ATCC 33942, Roseobacter denitrificans DSM 7001, Roseobacter denitrificans OCh 114, Roseobacter denitrificans str. OCh 114, Roseobacter denitrificans strain OCh 114, Roseobacter sp. OCh114
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