STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ78375.1Putative glutamine amidotransferase. (240 aa)    
Predicted Functional Partners:
SEA37004.1
Glutamate synthase (NADH) large subunit.
    
  0.903
SEA46283.1
L-glutamine synthetase.
  
 
 0.776
SEA52682.1
Glutamine synthetase.
  
 
 0.776
SDZ78431.1
Peptide/nickel transport system permease protein.
       0.766
SDZ78448.1
Peptide/nickel transport system permease protein.
       0.753
SDZ78394.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.752
SDZ78410.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.752
SDZ78905.1
Diaminobutyrate-2-oxoglutarate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.652
SDZ78467.1
Peptide/nickel transport system substrate-binding protein.
       0.592
SEA72894.1
4-aminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.553
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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