STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA13546.1Hypothetical protein. (395 aa)    
Predicted Functional Partners:
SEA13492.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
   
 0.808
SEA13524.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
       0.734
SEA13466.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.706
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.693
SDZ73862.1
Flagellar basal-body rod protein FlgG.
   
   0.584
SEA67874.1
Polysaccharide deacetylase.
  
     0.457
SEA66160.1
N-acetylmuramoyl-L-alanine amidase.
     0.447
SEA67896.1
Bax protein.
  
     0.439
SEA13411.1
Phosphotransacetylase.
       0.438
SEA13383.1
Protein TonB.
 
     0.436
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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