A0A0L8HVH8 protein (Octopus bimaculoides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L8HVH8

Uncharacterized protein. (517 aa)

Predicted Functional Partners:

A0A0L8GST2

0.931

A0A0L8GR20

0.921

A0A0L8HVI1

0.900

A0A0L8FH62

0.794

A0A0L8IB18

0.794

A0A0L8FW03

0.745

A0A0L8FW84

0.745

A0A0L8HER5

0.745

A0A0L8HZ09

0.728

A0A0L8FSX0

0.692

Your Current Organism:

Octopus bimaculoides

NCBI taxonomy Id: 37653
Other names: O. bimaculoides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L8FH62	A0A0L8FW03	RING-type domain-containing protein.	Uncharacterized protein.	0.792
A0A0L8FH62	A0A0L8FW84	RING-type domain-containing protein.	PRKCSH domain-containing protein.	0.792
A0A0L8FH62	A0A0L8GR20	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.972
A0A0L8FH62	A0A0L8GST2	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.967
A0A0L8FH62	A0A0L8HER5	RING-type domain-containing protein.	Uncharacterized protein.	0.792
A0A0L8FH62	A0A0L8HVH8	RING-type domain-containing protein.	Uncharacterized protein.	0.794
A0A0L8FH62	A0A0L8HVI1	RING-type domain-containing protein.	Uncharacterized protein.	0.794
A0A0L8FSX0	A0A0L8FW03	Uncharacterized protein.	Uncharacterized protein.	0.632
A0A0L8FSX0	A0A0L8FW84	Uncharacterized protein.	PRKCSH domain-containing protein.	0.632
A0A0L8FSX0	A0A0L8GR20	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.850
A0A0L8FSX0	A0A0L8GST2	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.749
A0A0L8FSX0	A0A0L8HER5	Uncharacterized protein.	Uncharacterized protein.	0.632
A0A0L8FSX0	A0A0L8HVH8	Uncharacterized protein.	Uncharacterized protein.	0.692
A0A0L8FSX0	A0A0L8HVI1	Uncharacterized protein.	Uncharacterized protein.	0.692
A0A0L8FW03	A0A0L8FH62	Uncharacterized protein.	RING-type domain-containing protein.	0.792
A0A0L8FW03	A0A0L8FSX0	Uncharacterized protein.	Uncharacterized protein.	0.632
A0A0L8FW03	A0A0L8GR20	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.911
A0A0L8FW03	A0A0L8GST2	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.924
A0A0L8FW03	A0A0L8HVH8	Uncharacterized protein.	Uncharacterized protein.	0.745
A0A0L8FW03	A0A0L8HVI1	Uncharacterized protein.	Uncharacterized protein.	0.745