Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Fjoh_1572 | Fjoh_1573 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Hypothetical protein. | 0.814 |
Fjoh_1572 | Fjoh_1574 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Uncharacterized protein. | 0.552 |
Fjoh_1572 | Fjoh_1575 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.507 |
Fjoh_1573 | Fjoh_1572 | Hypothetical protein. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.814 |
Fjoh_1573 | Fjoh_1574 | Hypothetical protein. | Uncharacterized protein. | 0.856 |
Fjoh_1573 | Fjoh_1575 | Hypothetical protein. | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.644 |
Fjoh_1574 | Fjoh_1572 | Uncharacterized protein. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.552 |
Fjoh_1574 | Fjoh_1573 | Uncharacterized protein. | Hypothetical protein. | 0.856 |
Fjoh_1574 | Fjoh_1575 | Uncharacterized protein. | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.565 |
Fjoh_1575 | Fjoh_1572 | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.507 |
Fjoh_1575 | Fjoh_1573 | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase. | Hypothetical protein. | 0.644 |
Fjoh_1575 | Fjoh_1574 | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase. | Uncharacterized protein. | 0.565 |