STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldMGldM; Protein required for gliding motility and chitin utilization; PMID 16199564. (513 aa)    
Predicted Functional Partners:
gldL
GldL; Protein required for gliding motility and chitin utilization; PMID 16199564.
 
 
 
 0.999
gldN
GldN; Protein required for gliding motility and chitin utilization; PMID 16199564.
 
   
 0.986
gldK
GldK; Protein required for gliding motility and chitin utilization; probable lipoprotein; PMID 16199564.
 
   
 0.974
sprE
SprE; Protein involved in gliding motility; TPR repeat-containing protein; probable lipoprotein.
  
   
 0.950
sprT
SprT; Protein involved in gliding motility and protein secretion; similar to Porphyromonas gingivalis gingipain secretion system protein PorT.
 
   
 0.948
sprA
SprA; Protein involved in gliding motility; similar to Porphyromonas gingivalis gingipain secretion system protein Sov.
  
   
 0.944
gldJ
GldJ; Lipoprotein required for gliding motility and chitin utilization; PMID 15805509.
 
   
 0.902
gldO
GldO; Protein involved in gliding motility; PMID 16199564.
 
   
 0.902
gldB
GldB; Lipoprotein required for gliding motility and chitin utilization; PMID 10648514.
  
   
 0.897
gldD
GldD; Lipoprotein required for gliding motility and chitin utilization; PMID 11418556.
  
   
 0.884
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.