STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldNGldN; Protein required for gliding motility and chitin utilization; PMID 16199564. (329 aa)    
Predicted Functional Partners:
gldM
GldM; Protein required for gliding motility and chitin utilization; PMID 16199564.
 
   
 0.986
gldL
GldL; Protein required for gliding motility and chitin utilization; PMID 16199564.
 
   
 0.974
gldK
GldK; Protein required for gliding motility and chitin utilization; probable lipoprotein; PMID 16199564.
 
   
 0.967
sprE
SprE; Protein involved in gliding motility; TPR repeat-containing protein; probable lipoprotein.
  
   
 0.944
sprT
SprT; Protein involved in gliding motility and protein secretion; similar to Porphyromonas gingivalis gingipain secretion system protein PorT.
 
   
 0.942
gldJ
GldJ; Lipoprotein required for gliding motility and chitin utilization; PMID 15805509.
 
   
 0.938
sprA
SprA; Protein involved in gliding motility; similar to Porphyromonas gingivalis gingipain secretion system protein Sov.
  
   
 0.933
gldD
GldD; Lipoprotein required for gliding motility and chitin utilization; PMID 11418556.
  
   
 0.930
gldI
GldI; Lipoprotein required for gliding motility and chitin utilization; peptidylprolyl isomerase, FKBP-type; PMID 15060031.
  
   
 0.907
gldB
GldB; Lipoprotein required for gliding motility and chitin utilization; PMID 10648514.
  
   
 0.895
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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