STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_3266Hypothetical protein. (456 aa)    
Predicted Functional Partners:
Fjoh_3262
Hypothetical protein.
 
  
 0.960
Fjoh_3267
Hypothetical protein.
 
     0.945
Fjoh_3277
Hypothetical protein.
 
   
 0.930
Fjoh_3260
PFAM: Rhs element Vgr protein.
 
   
 0.928
Fjoh_3268
Hypothetical protein.
 
     0.900
Fjoh_3269
Hypothetical protein.
 
     0.899
Fjoh_3261
Hypothetical protein.
 
  
  0.879
Fjoh_3263
PFAM: GPW/gp25 family protein.
 
     0.877
Fjoh_1795
Hypothetical protein.
 
  
  0.854
Fjoh_4014
Hypothetical protein.
 
  
  0.854
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.