STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_3878Candidate bifunctional acetylxylan esterase/feruloyl esterase; PFAM: putative esterase; protein of unknown function DUF303, acetylesterase putative. (560 aa)    
Predicted Functional Partners:
Fjoh_3875
Candidate beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
   
 0.923
Fjoh_1996
Candidate xylanase; Predicted lipoprotein.
   0.874
Fjoh_3876
PFAM: protein of unknown function DUF1680.
 
     0.854
Fjoh_3877
Hypothetical protein.
 
     0.853
Fjoh_3880
Candidate beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.802
Fjoh_3873
Candidate alpha-glycosidase; Glycoside hydrolase family 97.
 
    0.784
Fjoh_2079
Candidate xylanase; Predicted lipoprotein.
   0.750
Fjoh_3879
Lipolytic enzyme, G-D-S-L family; Predicted lipoprotein.
 
   
 0.706
Fjoh_3870
RagB/SusD domain protein; Predicted lipoprotein.
  
   
 0.674
Fjoh_3861
Candidate beta-glucosidase; PFAM: glycoside hydrolase, family 3 domain protein.
      
 0.635
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.