STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fjoh_4315PFAM: ABC transporter related; SMART: AAA ATPase. (259 aa)    
Predicted Functional Partners:
Fjoh_4314
PFAM: protein of unknown function DUF140; Belongs to the MlaE permease family.
 0.998
Fjoh_4316
PFAM: Mammalian cell entry related domain protein.
 
 0.995
Fjoh_0449
PFAM: protein of unknown function DUF140.
 
 0.985
Fjoh_4584
PFAM: Mammalian cell entry related domain protein.
  
 0.935
Fjoh_0450
PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 
0.911
Fjoh_4317
PFAM: AsmA family protein.
       0.650
Fjoh_4318
PFAM: protein of unknown function DUF1452.
       0.639
Fjoh_4319
PFAM: FAD dependent oxidoreductase.
       0.636
Fjoh_3136
PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
   
   0.622
Fjoh_3137
PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
   
   0.622
Your Current Organism:
Flavobacterium johnsoniae
NCBI taxonomy Id: 376686
Other names: F. johnsoniae UW101, Flavobacterium johnsoniae ATCC 17061, Flavobacterium johnsoniae DSM 2064, Flavobacterium johnsoniae IAM 14304, Flavobacterium johnsoniae IFO 14942, Flavobacterium johnsoniae MYX.1.1.1, Flavobacterium johnsoniae NBRC 14942, Flavobacterium johnsoniae NCIB 11054, Flavobacterium johnsoniae UW101, Flavobacterium johnsoniae str. UW101, Flavobacterium johnsoniae strain UW101
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.