• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
TERTU_0009 protein (Teredinibacter turnerae T7901) - STRING interaction network
"TERTU_0009" - Von Willebrand factor type A domain protein in Teredinibacter turnerae T7901
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0009Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092 (593 aa)    
Predicted Functional Partners:
TERTU_2240
Conserved repeat domain protein; Identified by match to protein family HMM PF00691; match to protein family HMM PF01345; match to protein family HMM PF01389; match to protein family HMM TIGR01451 (3228 aa)
 
 
      0.823
TERTU_3450
Thrombospondin type 3 repeat family protein; Identified by match to protein family HMM PF00691; match to protein family HMM PF02412; match to protein family HMM PF05345; match to protein family HMM TIGR03501 (3177 aa)
 
 
      0.821
TERTU_4311
Uncharacterized protein; Identified by glimmer; putative (682 aa)
   
        0.786
TERTU_4526
Lipid A biosynthesis2-(Lauroyl)-lipid IVA acyltransferase family protein; Identified by match to protein family HMM PF03279 (290 aa)
   
        0.785
TERTU_4520
Lipid A biosynthesis2-(Lauroyl)-lipid IVA acyltransferase family protein; Identified by match to protein family HMM PF03279 (319 aa)
   
        0.784
TERTU_3354
CARDB domain protein; Phosphodiesterase superamily; identified by match to protein family HMM PF07705 (796 aa)
 
          0.783
TERTU_3729
Peptidase, S8/S53 family; Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family (2564 aa)
 
          0.783
TERTU_2702
Uncharacterized protein; Identified by glimmer; putative (343 aa)
   
          0.783
TERTU_0450
annotation not available (468 aa)
   
          0.783
TERTU_0345
annotation not available (799 aa)
   
          0.783
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
Server load: low (10%) [HD]