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TERTU_0021 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0021" - Integral membrane protein in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0021Integral membrane protein (204 aa)    
Predicted Functional Partners:
TERTU_0019
Lipoprotein (546 aa)
              0.859
TERTU_0018
Translocator protein, LysE family (203 aa)
              0.859
TERTU_2504
Hypothetical protein (258 aa)
   
          0.682
TERTU_1647
Hypothetical protein (933 aa)
   
          0.597
TERTU_0022
acetoacetyl-CoA synthetase (638 aa)
              0.573
TERTU_1672
Hypothetical protein (165 aa)
   
          0.541
TERTU_1152
Hypothetical protein (278 aa)
   
          0.540
TERTU_1673
TonB family protein (319 aa)
   
          0.529
TERTU_3741
Hypothetical protein (176 aa)
   
          0.509
TERTU_3746
Hypothetical protein (964 aa)
   
          0.504
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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