STRINGSTRING
TERTU_0024 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0024" - Hypothetical protein in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0024Hypothetical protein (138 aa)    
Predicted Functional Partners:
TERTU_0025
Acyltransferase domain-containing protein (235 aa)
              0.834
TERTU_0399
Hypothetical protein (67 aa)
   
          0.690
glyQ
glycyl-tRNA synthetase subunit alpha (316 aa)
              0.649
glyS
glycyl-tRNA synthetase subunit beta (686 aa)
              0.649
TERTU_3189
Hypothetical protein (190 aa)
   
          0.619
TERTU_3553
Hypothetical protein (61 aa)
   
          0.618
TERTU_2531
Hypothetical protein (978 aa)
   
          0.604
TERTU_3802
lysyl-tRNA synthetase, class-2 (414 aa)
   
          0.539
TERTU_0028
Lipid A biosynthesis lauroyl acyltransferase (294 aa)
 
          0.529
TERTU_4009
YceI family protein (195 aa)
   
          0.521
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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