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TERTU_0044 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0044" - Hypothetical protein in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0044Hypothetical protein (425 aa)    
Predicted Functional Partners:
TERTU_3801
Lipoprotein (280 aa)
   
          0.722
TERTU_3802
lysyl-tRNA synthetase, class-2 (414 aa)
   
          0.663
TERTU_1169
Lipoprotein (983 aa)
   
          0.660
TERTU_3800
Hypothetical protein (178 aa)
   
          0.657
TERTU_0346
Lipoprotein (673 aa)
   
          0.655
TERTU_3829
Hypothetical protein (1600 aa)
   
          0.623
TERTU_1105
MSHA pilin protein, MshB (180 aa)
   
          0.608
TERTU_1080
Type IV pilus assembly protein PilZ (105 aa)
   
          0.581
TERTU_2877
Lipoprotein (867 aa)
   
          0.577
TERTU_2147
Hypothetical protein (520 aa)
   
          0.574
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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