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TERTU_0047 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0047" - Carbohydrate binding module family 2 domain-containing protein in Teredinibacter turnerae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0047Carbohydrate binding module family 2 domain-containing protein (199 aa)    
Predicted Functional Partners:
TERTU_0046
Carbohydrate binding module family 33 and 10 domain-containing protein (332 aa)
          0.955
TERTU_3996
Cellobiohydrolase (573 aa)
 
          0.843
TERTU_2898
Cellobiohydrolase (650 aa)
 
          0.825
celA
Glycoside hydrolase families 5 and 6 domain protein (1010 aa)
 
          0.779
TERTU_0285
Chitinase (608 aa)
   
          0.778
TERTU_4344
Glycoside hydrolase family 5 domain-containing protein (579 aa)
 
          0.775
TERTU_1483
Pectate lyase (1276 aa)
   
          0.771
TERTU_2703
Carbohydrate esterase, family 3 (486 aa)
 
          0.769
TERTU_2894
Glycoside hydrolase family 5 domain-containing protein (814 aa)
 
          0.764
TERTU_0645
Glycoside hydrolase family 9 domain-containing protein (876 aa)
   
          0.755
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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