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TERTU_0048 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0048" - Hypothetical protein in Teredinibacter turnerae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0048Hypothetical protein (522 aa)    
Predicted Functional Partners:
TERTU_0047
Carbohydrate binding module family 2 domain-containing protein (199 aa)
              0.731
TERTU_3173
Type IV pilus assembly protein PilX (177 aa)
   
          0.551
TERTU_3407
roadblock/LC7 family protein (130 aa)
   
          0.525
TERTU_0046
Carbohydrate binding module family 33 and 10 domain-containing protein (332 aa)
              0.436
TERTU_3242
Hypothetical protein (218 aa)
   
          0.434
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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