STRINGSTRING
TERTU_0058 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0058" - Von Willebrand factor A in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0058Von Willebrand factor A (1559 aa)    
Predicted Functional Partners:
TERTU_2704
TonB-dependent receptor domain-containing protein (703 aa)
   
          0.705
TERTU_1851
Hypothetical protein (212 aa)
   
          0.702
TERTU_2002
TonB-dependent receptor (680 aa)
   
          0.672
TERTU_0710
Response regulator receiver domain-containing protein (399 aa)
   
          0.665
TERTU_2693
Transposase, IS4 family protein (381 aa)
   
          0.618
TERTU_2188
Transposase, IS4 family protein (519 aa)
   
          0.585
TERTU_3465
TonB-dependent receptor (845 aa)
   
          0.573
TERTU_2796
Hypothetical protein (1208 aa)
   
          0.571
TERTU_1850
Hypothetical protein (947 aa)
   
          0.568
TERTU_3965
Membrane-fusion protein (399 aa)
   
          0.551
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
Server load: low (8%) [HD]