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TERTU_0084 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0084" - Hypothetical protein in Teredinibacter turnerae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0084Hypothetical protein (217 aa)    
Predicted Functional Partners:
TERTU_0085
Cytochrome oxidase assembly protein (423 aa)
 
        0.933
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (311 aa)
 
        0.912
TERTU_0083
Hypothetical protein (243 aa)
 
        0.897
TERTU_0087
Ggdef (221 aa)
              0.883
TERTU_0082
Hypothetical protein (86 aa)
              0.602
TERTU_1169
Lipoprotein (983 aa)
   
          0.587
TERTU_2926
Hypothetical protein (513 aa)
   
          0.518
TERTU_0639
Lipoprotein (611 aa)
   
          0.488
TERTU_2925
Ggdef (273 aa)
   
          0.469
TERTU_3694
GAF sensor signal transduction histidine kinase (479 aa)
   
        0.462
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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