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TERTU_0088 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0088" - Hypothetical protein in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0088Hypothetical protein (262 aa)    
Predicted Functional Partners:
TERTU_1169
Lipoprotein (983 aa)
   
          0.744
TERTU_0710
Response regulator receiver domain-containing protein (399 aa)
   
          0.724
TERTU_1035
Hypothetical protein (467 aa)
   
          0.695
TERTU_3829
Hypothetical protein (1600 aa)
   
          0.693
TERTU_2002
TonB-dependent receptor (680 aa)
   
          0.689
TERTU_2877
Lipoprotein (867 aa)
   
          0.684
TERTU_2796
Hypothetical protein (1208 aa)
   
          0.678
TERTU_3505
Ig domain-containing protein (3089 aa)
   
          0.672
TERTU_0310
Cadherin (2365 aa)
   
          0.662
TERTU_0715
Hypothetical protein (223 aa)
   
          0.661
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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