STRINGSTRING
TERTU_0090 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0090" - Hypothetical protein in Teredinibacter turnerae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0090Hypothetical protein (372 aa)    
Predicted Functional Partners:
TERTU_0091
TonB-dependent receptor (794 aa)
 
          0.898
TERTU_2354
TonB-dependent receptor (829 aa)
   
          0.657
TERTU_2704
TonB-dependent receptor domain-containing protein (703 aa)
   
          0.533
TERTU_2050
Outer membrane protein (803 aa)
   
          0.490
TERTU_1900
Carbohydrate binding module family 9 domain-containing protein (250 aa)
   
          0.471
TERTU_1359
Hypothetical protein (377 aa)
   
          0.452
TERTU_2838
Fatty acid cis-trans isomerase (785 aa)
   
          0.441
TERTU_4441
Transposase (315 aa)
   
          0.439
TERTU_4478
Transposase IS4 family protein (500 aa)
   
          0.436
TERTU_0142
Hypothetical protein (628 aa)
   
          0.436
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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