STRINGSTRING
TERTU_0091 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0091" - TonB-dependent receptor in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0091TonB-dependent receptor (794 aa)    
Predicted Functional Partners:
TERTU_0090
Hypothetical protein (372 aa)
 
          0.898
TERTU_2016
TonB-dependent receptor (789 aa)
   
          0.724
TERTU_3527
Transmembrane sensor (345 aa)
 
          0.705
TERTU_1903
Hypothetical protein (432 aa)
   
          0.645
TERTU_3352
TonB-dependent receptor (848 aa)
   
          0.621
TERTU_1359
Hypothetical protein (377 aa)
   
          0.620
TERTU_2354
TonB-dependent receptor (829 aa)
   
          0.613
TERTU_0524
Response regulator receiver domain-containing protein (294 aa)
   
          0.595
TERTU_4535
Hypothetical protein (390 aa)
   
          0.591
TERTU_3525
RNA polymerase sigma factor, sigma-70 family (213 aa)
   
          0.586
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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