STRINGSTRING
TERTU_0093 protein (Teredinibacter turnerae) - STRING interaction network
"TERTU_0093" - YHS domain-containing protein in Teredinibacter turnerae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERTU_0093YHS domain-containing protein (160 aa)    
Predicted Functional Partners:
TERTU_1150
Hypothetical protein (181 aa)
 
          0.824
TERTU_1151
Hypothetical protein (239 aa)
 
          0.799
TERTU_1149
Hypothetical protein (153 aa)
 
          0.783
TERTU_1148
D-alanine-D-alanine ligase (359 aa)
 
          0.700
TERTU_2140
Hypothetical protein (712 aa)
   
          0.477
TERTU_3506
Hypothetical protein (169 aa)
   
          0.473
TERTU_4029
Hypothetical protein (390 aa)
   
          0.449
TERTU_4201
Urease accessory protein UreH (205 aa)
   
          0.444
TERTU_1147
Hypothetical protein (199 aa)
 
          0.421
TERTU_4616
Hypothetical protein (160 aa)
   
          0.410
Your Current Organism:
Teredinibacter turnerae
NCBI taxonomy Id: 377629
Other names: A. genera incertae sedis, Alteromonadales genera incertae sedis, T. turnerae, T. turnerae T7901, Teredinibacter, Teredinibacter Distel et al. 2002, Teredinibacter turnerae, Teredinibacter turnerae Distel et al. 2002, Teredinibacter turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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